euL1db
The European database of L1-HS retrotransposon insertions in humans

Home Background Search Browse Utilities Help FAQ Data Contact
Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

165 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip22 chr1 8665913 8665913 - unknown germline . no 238 RERE
srip546 chr1 42483965 42483965 + unknown germline . no 238 HIVEP3
srip882 chr1 56535813 56535813 - unknown germline . no 238 .
srip1162 chr1 62390939 62390939 . unknown germline . no 238 INADL
srip1540 chr1 67674542 67674542 + unknown germline . no 238 IL23R
srip2475 chr1 95801850 95801850 - unknown germline . no 238 .
srip3061 chr1 102568916 102568916 + unknown germline . no 238 .
srip4537 chr1 162610632 162610632 + unknown germline . no 238 DDR2
srip5055 chr1 169524865 169524865 + unknown germline . no 238 F5
srip6239 chr1 194934643 194934643 . unknown germline . no 238 .
srip7073 chr1 230664826 230664826 + unknown germline . no 238 .
srip7187 chr1 234935093 234935093 + unknown germline . no 238 .
srip7391 chr1 242311570 242311570 + unknown germline . no 238 PLD5
srip7824 chr10 19065791 19065791 - unknown germline . no 238 .
srip8452 chr10 25707693 25707693 - unknown germline . no 238 GPR158
srip9001 chr10 59508865 59508865 + unknown germline . no 238 .
srip9539 chr10 68803690 68803690 + unknown germline . no 238 LRRTM3;CTNNA3
srip9585 chr10 68949319 68949319 + unknown germline . no 238 CTNNA3
srip9662 chr10 73657786 73657786 . unknown germline . no 238 .
srip9812 chr10 82972200 82972200 . unknown germline . no 238 .
srip11832 chr10 124455225 124455225 + unknown germline . no 238 .
srip12549 chr11 15380252 15380252 + unknown germline . no 238 .
srip13822 chr11 33670130 33670130 + unknown germline . no 238 C11orf41
srip13862 chr11 36558481 36558481 - unknown germline . no 238 .
srip14247 chr11 41831803 41831803 - unknown germline . no 238 .
srip14725 chr11 48360744 48360744 - unknown germline . no 238 .
srip15374 chr11 58171843 58171843 + unknown germline . no 238 .
srip17186 chr11 94684368 94684368 + unknown germline . no 238 .
srip18229 chr11 112084613 112084613 + unknown germline . no 238 BCO2
srip18275 chr11 114895519 114895519 + unknown germline . no 238 .
srip18479 chr11 123241793 123241793 + unknown germline . no 238 .
srip19267 chr11 134305645 134305645 - unknown germline . no 238 .
srip19890 chr12 11219195 11219195 - unknown germline . no 238 PRH1-PRR4
srip20126 chr12 12933687 12933687 - unknown germline . no 238 APOLD1
srip20466 chr12 25775847 25775847 - unknown germline . no 238 IFLTD1
srip20749 chr12 28226420 28226420 - unknown germline . no 238 .
srip21168 chr12 34017331 34017331 - unknown germline . no 238 .
srip22209 chr12 43256979 43256979 - unknown germline . no 238 .
srip26383 chr12 126802936 126802936 - unknown germline . no 238 .
srip26904 chr13 22489798 22489798 + unknown germline . no 238 .
srip28337 chr13 57689691 57689691 - unknown germline . no 238 .
srip28591 chr13 61221164 61221164 - unknown germline . no 238 .
srip29082 chr13 61462340 61462340 - unknown germline . no 238 .
srip30640 chr13 78693217 78693217 + unknown germline . no 238 .
srip30957 chr13 79259790 79259790 - unknown germline . no 238 .
srip31574 chr13 85871607 85871607 - unknown germline . no 238 .
srip31987 chr13 86340151 86340151 - unknown germline . no 238 .
srip33539 chr13 104296230 104296230 - unknown germline . no 238 .
srip35226 chr14 28301256 28301256 + unknown germline . no 238 .
srip35877 chr14 36674752 36674752 + unknown germline . no 238 .
srip36318 chr14 39875089 39875089 + unknown germline . no 238 FBXO33
srip37337 chr14 59220393 59220393 + unknown germline . no 238 .
srip38635 chr14 86381803 86381803 - unknown germline . no 238 .
srip39524 chr15 34031845 34031845 - unknown germline . no 238 RYR3
srip40218 chr15 47507331 47507331 - unknown germline . no 238 SEMA6D
srip41597 chr15 61328966 61328966 - unknown germline . no 238 RORA
srip41724 chr15 62169644 62169644 - unknown germline . no 238 VPS13C
srip42257 chr15 77910870 77910870 . unknown germline . no 238 LINGO1
srip42605 chr15 85140900 85140900 + unknown germline . no 238 .
srip43255 chr15 100931152 100931152 - unknown germline . no 238 .
srip46335 chr16 71028016 71028016 + unknown germline . no 238 HYDIN
srip46435 chr16 81119841 81119841 . unknown germline . no 238 GCSH
srip46520 chr17 4314989 4314989 - unknown germline . no 238 .
srip47201 chr17 28398310 28398310 + unknown germline . no 238 EFCAB5
srip48984 chr18 15095255 15095255 - unknown germline . no 238 .
srip50024 chr18 49216225 49216225 - unknown germline . no 238 .
srip50398 chr18 51488332 51488332 - unknown germline . no 238 .
srip51522 chr18 73290639 73290639 - unknown germline . no 238 .
srip52432 chr19 45444694 45444694 + unknown germline . no 238 .
srip52759 chr2 6798283 6798283 - unknown germline . no 238 .
srip52787 chr2 7050600 7050600 + unknown germline . no 238 .
srip53474 chr2 23191008 23191008 - unknown germline . no 238 .
srip53920 chr2 35879345 35879345 + unknown germline . no 238 .
srip54108 chr2 36381245 36381245 + unknown germline . no 238 .
srip54272 chr2 36570260 36570260 - unknown germline . no 238 .
srip56525 chr2 83188335 83188335 + unknown germline . no 238 .
srip57862 chr2 133867344 133867344 + unknown germline . no 238 NCKAP5
srip57902 chr2 137426137 137426137 - unknown germline . no 238 .
srip58233 chr2 141852915 141852915 - unknown germline . no 238 LRP1B
srip58319 chr2 142785302 142785302 + unknown germline . no 238 LRP1B
srip58582 chr2 144010796 144010796 + unknown germline . no 238 ARHGAP15
srip59218 chr2 147020925 147020925 + unknown germline . no 238 .
srip59619 chr2 156527835 156527835 + unknown germline . no 238 .
srip60152 chr2 178676252 178676252 - unknown germline . no 238 PDE11A
srip60531 chr2 181000547 181000547 + unknown germline . no 238 .
srip60789 chr2 191478707 191478707 - unknown germline . no 238 .
srip61926 chr2 221278227 221278227 - unknown germline . no 238 .
srip62479 chr2 234095319 234095319 . unknown germline . no 238 INPP5D
srip62482 chr2 234251732 234251732 . unknown germline . no 238 SAG
srip63461 chr20 16479499 16479499 - unknown germline . no 238 KIF16B
srip64041 chr20 25895497 25895497 - unknown germline . no 238 .
srip64067 chr20 25903875 25903875 - unknown germline . no 238 .
srip64074 chr20 25947887 25947887 . unknown germline . no 238 .
srip64776 chr20 41952105 41952105 - unknown germline . no 238 .
srip65535 chr21 14390184 14390184 - unknown germline . no 238 .
srip65864 chr21 19517305 19517305 - unknown germline . no 238 .
srip66922 chr21 29069178 29069178 + unknown germline . no 238 .
srip67847 chr22 22715595 22715595 + unknown germline . no 238 IGL@
srip71084 chr3 26524455 26524455 - unknown germline . no 238 .
srip71905 chr3 38626071 38626071 + unknown germline . no 238 SCN5A
srip72724 chr3 55788576 55788576 + unknown germline . no 238 ERC2
srip73393 chr3 59852898 59852898 + unknown germline . no 238 FHIT
srip73798 chr3 75101217 75101217 + unknown germline . no 238 .
srip74859 chr3 82144861 82144861 - unknown germline . no 238 .
srip77255 chr3 123590719 123590719 + unknown germline . no 238 MYLK
srip80356 chr3 176091325 176091325 + unknown germline . no 238 .
srip80857 chr3 181192836 181192836 + unknown germline . no 238 .
srip81751 chr3 188234425 188234425 + unknown germline . no 238 LPP
srip82361 chr4 9451067 9451067 . unknown germline . no 238 DEFB131
srip84700 chr4 47007787 47007787 - unknown germline . no 238 .
srip86177 chr4 66413931 66413931 + unknown germline . no 238 EPHA5
srip86348 chr4 66809075 66809075 - unknown germline . no 238 .
srip87682 chr4 82515393 82515393 . unknown germline . no 238 .
srip90350 chr4 115132699 115132699 + unknown germline . no 238 .
srip90795 chr4 120717536 120717536 - unknown germline . no 238 .
srip93736 chr4 157447968 157447968 + unknown germline . no 238 .
srip93883 chr4 158907280 158907280 - unknown germline . no 238 .
srip95433 chr4 190899841 190899841 . unknown germline . no 238 .
srip96077 chr5 8749521 8749521 + unknown germline . no 238 .
srip97232 chr5 26093147 26093147 + unknown germline . no 238 .
srip97745 chr5 33633341 33633341 - unknown germline . no 238 ADAMTS12
srip98157 chr5 34459996 34459996 . unknown germline . no 238 .
srip100721 chr5 89450775 89450775 + unknown germline . no 238 .
srip102978 chr5 124155340 124155340 - unknown germline . no 238 .
srip103356 chr5 125040043 125040043 + unknown germline . no 238 .
srip104856 chr5 154873935 154873935 - unknown germline . no 238 .
srip105252 chr5 155619871 155619871 + unknown germline . no 238 .
srip105731 chr5 160435672 160435672 - unknown germline . no 238 .
srip107067 chr6 13191023 13191023 + unknown germline . no 238 PHACTR1
srip107731 chr6 19258220 19258220 + unknown germline . no 238 .
srip108720 chr6 46310300 46310300 + unknown germline . no 238 .
srip109129 chr6 57494221 57494221 - unknown germline . no 238 PRIM2
srip111337 chr6 83678122 83678122 - unknown germline . no 238 UBE2CBP
srip112050 chr6 91669514 91669514 - unknown germline . no 238 .
srip112717 chr6 102283765 102283765 - unknown germline . no 238 GRIK2
srip115196 chr6 159947375 159947375 . unknown germline . no 238 RPL21P69
srip115705 chr6 162181268 162181268 + unknown germline . no 238 PARK2
srip116286 chr7 16962372 16962372 . unknown germline . no 238 .
srip117635 chr7 53652510 53652510 - unknown germline . no 238 .
srip118890 chr7 70188682 70188682 - unknown germline . no 238 AUTS2
srip119831 chr7 84901724 84901724 - unknown germline . no 238 .
srip120253 chr7 85044744 85044744 . unknown germline . no 238 .
srip120936 chr7 95370803 95370803 + unknown germline . no 238 .
srip121169 chr7 107410625 107410625 - unknown germline . no 238 SLC26A3
srip121734 chr7 107829256 107829256 + unknown germline . no 238 NRCAM
srip122262 chr7 110484750 110484750 + unknown germline . no 238 IMMP2L
srip122535 chr7 116483647 116483647 - unknown germline . no 238 .
srip122565 chr7 119446559 119446559 - unknown germline . no 238 .
srip124368 chr8 5829277 5829277 - unknown germline . no 238 .
srip126880 chr8 67381884 67381884 - unknown germline . no 238 .
srip128260 chr8 87315041 87315041 + unknown germline . no 238 .
srip128785 chr8 109052010 109052010 - unknown germline . no 238 RSPO2
srip130128 chr8 131041227 131041227 + unknown germline . no 238 .
srip131734 chr9 19671056 19671056 . unknown germline . no 238 SLC24A2
srip133642 chr9 34904794 34904794 - unknown germline . no 238 .
srip135879 chr9 118083873 118083873 - unknown germline . no 238 DEC1
srip136276 chrX 4659603 4659603 - unknown germline . no 238 .
srip136819 chrX 32379293 32379293 - unknown germline . no 238 DMD
srip137255 chrX 54917144 54917144 + unknown germline . no 238 .
srip140457 chrX 111557754 111557754 - unknown germline . no 238 ZCCHC16
srip140811 chrX 119892837 119892837 - unknown germline . no 238 .
srip140873 chrX 120842925 120842925 - unknown germline . no 238 .
srip141081 chrX 122664864 122664864 - unknown germline . no 238 .
srip141379 chrX 129525275 129525275 - unknown germline . no 238 .
srip142276 chrY 13490336 13490336 + unknown germline . no 238 .